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Isolation and Characterization of Gardnerella Phage vB_Gva_AB1, a Bacteriophage Infecting a Clinical Strain of Gardnerella vaginalis

Alexia Bordigoni , Sonia Bouchard , Christelle Desnues
Microbiology Resource Announcements, 2021, 10 (12), ⟨10.1128/MRA.00053-21⟩
Journal articles hal-03203911v1
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The Kaumoebavirus LCC10 Genome Reveals a Unique Gene Strand Bias among “Extended Asfarviridae”

Khalil Geballa-Koukoulas , Julien Andreani , Bernard La Scola , Guillaume Blanc
Viruses, 2021, 13 (2), pp.148. ⟨10.3390/v13020148⟩
Journal articles hal-03118634v1
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Procaryotic Diversity and Hydrogenotrophic Methanogenesis in an Alkaline Spring (La Crouen, New Caledonia)

Marianne Quéméneur , Nan Mei , Christophe Monnin , Anne Postec , Laura Wils , et al.
Microorganisms, 2021, 9 (7), pp.1360. ⟨10.3390/microorganisms9071360⟩
Journal articles hal-03279565v1
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Similar Methanogenic Shift but Divergent Syntrophic Partners in Anaerobic Digesters Exposed to Direct versus Successive Ammonium Additions

Julie Hardy , Patricia Bonin , Adele Lazuka , Estelle Gonidec , Sophie Guasco , et al.
Microbiology Spectrum, 2021, 9 (2), ⟨10.1128/Spectrum.00805-21⟩
Journal articles hal-03435672v1
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Does the Composition of the Gut Bacteriome Change during the Growth of Tuna?

Elsa Gadoin , Lucile Durand , Aurélie Guillou , Sandrine Crochemore , Thierry Bouvier , et al.
Microorganisms, 2021, 9 (6), pp.1157. ⟨10.3390/microorganisms9061157⟩
Journal articles hal-03332247v1
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On the barium–oxygen consumption relationship in the Mediterranean Sea: implications for mesopelagic marine snow remineralization

Stéphanie Jacquet , Dominique Lefèvre , Christian Tamburini , Marc Garel , Frédéric A.C. Le Moigne , et al.
Biogeosciences, 2021, 18 (6), pp.2205-2212. ⟨10.5194/bg-18-2205-2021⟩
Journal articles hal-03357294v1
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Metal-containing PAS/GAF domains in bacterial sensors

Romain Pardoux , Alain Dolla , Corinne Aubert
Coordination Chemistry Reviews, 2021, 442, pp.214000. ⟨10.1016/j.ccr.2021.214000⟩
Journal articles hal-03249747v1
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Elutriate preparation affects embryo development test with Paracentrotus lividus: An in-depth study on the differences between two protocols and three different sediment/water mixing times

Davide Sartori , Simona Macchia , Nicolas Layglon , Sébastien d'Onofrio , Benjamin Misson , et al.
Ecotoxicology and Environmental Safety, 2021, ⟨10.1016/j.ecoenv.2021.112010⟩
Journal articles hal-03148212v1
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Integration of spatio-temporal variations of surface metabolomes and epibacterial communities highlights the importance of copper stress as a major factor shaping host-microbiota interactions within a Mediterranean seaweed holobiont

Benoît Paix , Nicolas Layglon , Christophe Le Poupon , Sébastien D’onofrio , Benjamin Misson , et al.
Microbiome, 2021, 9 (1), ⟨10.1186/s40168-021-01124-8⟩
Journal articles hal-03426129v1
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Identification of enriched hyperthermophilic microbial communities from a deep-sea hydrothermal vent chimney under electrolithoautotrophic culture conditions

Guillaume Pillot , Oulfat Amin Ali , Sylvain Davidson , Laetitia Shintu , Anne Godfroy , et al.
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-94135-2⟩
Journal articles hal-03427430v1
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Phosphorus cycling in the upper waters of the Mediterranean Sea (PEACETIME cruise): relative contribution of external and internal sources

Elvira Pulido-Villena , Karine Desboeufs , Kahina Djaoudi , France van Wambeke , Stéphanie Barrillon , et al.
Biogeosciences, 2021, 18 (21), pp.5871 - 5889. ⟨10.5194/bg-18-5871-2021⟩
Journal articles hal-03418751v1
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Limited influence of marine sediment lyophilization on prokaryotic community structure assessed via amplicon sequencing: an example from environmentally contrasted sediment layers in Toulon harbor (France)

Benjamin Misson , Cédric Garnier , Alexandre J Poulain
PeerJ, 2021, 9, pp.e11075. ⟨10.7717/peerj.11075⟩
Journal articles hal-03191488v1
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Pacmanvirus S19, the Second Pacmanvirus Isolated from Sewage Waters in Oran, Algeria

Guillaume Blanc , Khalil Geballa-Koukoulas , Souhila Abdi , Bernard La Scola , Julien Andreani
Microbiology Resource Announcements, 2021, 10 (42), ⟨10.1128/MRA.00693-21⟩
Journal articles hal-03394563v1
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Viability and stress state of bacteria associated with primary production or zooplankton-derived suspended particulate matter in summer along a transect in Baffin Bay (Arctic Ocean)

Christopher Burot , Rémi Amiraux , Patricia Bonin , Sophie Guasco , Marcel Babin , et al.
Science of the Total Environment, 2021, 770, pp.145252. ⟨10.1016/j.scitotenv.2021.145252⟩
Journal articles hal-03154542v1
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Influence of Meteorological Conditions and Aerosol Properties on the COVID-19 Contamination of the Population in Coastal and Continental Areas in France: Study of Offshore and Onshore Winds

Jacques Piazzola , William Bruch , Christelle Desnues , Philippe Parent , Christophe Yohia , et al.
Atmosphere, 2021, 12 (4), pp.523. ⟨10.3390/atmos12040523⟩
Journal articles hal-03210779v1
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Effects of nickel oxide nanoparticles on survival, reproduction, and oxidative stress biomarkers in the marine calanoid copepod Centropages ponticus under short-term exposure

Emna Djebbi , Delphine Bonnet , Olivier Pringault , Khawla Tlili , Mohamed Néjib Daly Yahia
Environmental Science and Pollution Research, 2021, ⟨10.1007/s11356-020-11781-1⟩
Journal articles hal-03159234v1
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Evolution of Thermophilic Microbial Communities from a Deep-Sea Hydrothermal Chimney under Electrolithoautotrophic Conditions with Nitrate

Guillaume Pillot , Oulfat Amin Ali , Sylvain Davidson , Laetitia Shintu , Yannick Combet-Blanc , et al.
Microorganisms, 2021, 9 (12), pp.2475. ⟨10.3390/microorganisms9122475⟩
Journal articles hal-03563636v1
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Alkalicella caledoniensis gen. nov., sp. nov., a novel alkaliphilic anaerobic bacterium isolated from ‘La Crouen’ alkaline thermal spring, New Caledonia

Marianne Quéméneur , Gaël Erauso , Manon Bartoli , Céline Vandecasteele , Laura Wils , et al.
International Journal of Systematic and Evolutionary Microbiology, 2021, 71 (5), pp.004810. ⟨10.1099/ijsem.0.004810⟩
Journal articles hal-03231234v1
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Phylogenomic fingerprinting of tempo and functions of horizontal gene transfer within ochrophytes

Richard G Dorrell , Adrien Villain , Benoît Perez-Lamarque , Guillemette Audren de Kerdrel , Giselle Mccallum , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (4), ⟨10.1073/pnas.2009974118/-/DCSupplemental⟩
Journal articles mnhn-03969507v1
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COVID-19 drug practices risk antimicrobial resistance evolution

Ebrahim Afshinnekoo , Chandrima Bhattacharya , Ana Burguete-García , Eduardo Castro-Nallar , Youping Deng , et al.
The Lancet Microbe, 2021, ⟨10.1016/S2666-5247(21)00039-2⟩
Journal articles hal-03160391v1
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A global metagenomic map of urban microbiomes and antimicrobial resistance

David Danko , Daniela Bezdan , Evan Afshin , Sofia Ahsanuddin , Chandrima Bhattacharya , et al.
Cell, 2021, 184 (13), pp.3376-3393.e17. ⟨10.1016/j.cell.2021.05.002⟩
Journal articles hal-03357730v1
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Synergistic effects of temperature and light affect the relationship between Taonia atomaria and its epibacterial community: a controlled conditions study

Benoit Paix , Philippe Potin , Gaëtan Schires , Christophe Le Poupon , B. Misson , et al.
Environmental Microbiology, 2021, 23 (11), pp.6777-6797. ⟨10.1111/1462-2920.15758⟩
Journal articles hal-03400714v1
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Use of Stress Signals of Their Attached Bacteria to Monitor Sympagic Algae Preservation in Canadian Arctic Sediments

Rémi Amiraux , Patricia Bonin , Burot Christopher , Jean-Francois Rontani
Microorganisms, 2021, 9 (12), pp.2626. ⟨10.3390/microorganisms9122626⟩
Journal articles hal-03525505v1
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Hydrothermal plumes as hotspots for deep-ocean heterotrophic microbial biomass production

Cécile Cathalot , Erwan Roussel , Antoine Perhirin , Vanessa Creff , Jean-Pierre Donval , et al.
Nature Communications, 2021, 12 (1), ⟨10.1038/s41467-021-26877-6⟩
Journal articles hal-03456814v1
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Trace Metal Contamination Impacts Predicted Functions More Than Structure of Marine Prokaryotic Biofilm Communities in an Anthropized Coastal Area

Clément Coclet , Cédric Garnier , Sébastien d'Onofrio , Gaël Durrieu , Emilie Pasero , et al.
Frontiers in Microbiology, 2021, 12, pp.589948. ⟨10.3389/fmicb.2021.589948⟩
Journal articles hal-03148203v1
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RadA, a MSCRAMM Adhesin of the Dominant Symbiote Ruminococcus gnavus E1, Binds Human Immunoglobulins and Intestinal Mucins

Marc Maresca , Radia Alatou , Ange Pujol , Cendrine Nicoletti , Josette Perrier , et al.
Biomolecules, 2021, 11 (11), pp.1613. ⟨10.3390/biom11111613⟩
Journal articles hal-03455626v1
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Development and validation of a multiplex qPCR assay for detection and relative quantification of HPV16 and HPV18 E6 and E7 oncogenes

Alexia Bordigoni , Anne Motte , Hervé Tissot-Dupont , Philippe Colson , Christelle Desnues
Scientific Reports, 2021, ⟨10.1038/s41598-021-83489-2⟩
Journal articles hal-03145129v1
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Efficiency of benthic diatom-associated bacteria in the removal of benzo(a)pyrene and fluoranthene

Oumayma Kahla , Sondes Melliti Ben Garali , Fatma Karray , Manel Ben Abdallah , Najwa Kallel , et al.
Science of the Total Environment, 2021, 751, pp.141399. ⟨10.1016/j.scitotenv.2020.141399⟩
Journal articles hal-02925530v1
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The Hungry Snail, the Fragile Coral, and the Friendly Microbe

Yvan Bettarel , Elyse Boudin , Sébastien Halary , Jean-Christophe Auguet , Jean Péronnin , et al.
Frontiers for Young Minds, 2021, 9, pp.573856. ⟨10.3389/frym.2021.573856⟩
Journal articles hal-03415940v1
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Bioluminescence and Photoreception in Unicellular Organisms: Light-Signalling in a Bio-Communication Perspective

Youri Timsit , Magali Lescot , Martha Valiadi , Fabrice Not
International Journal of Molecular Sciences, 2021, 22 (21), pp.11311. ⟨10.3390/ijms222111311⟩
Journal articles hal-03402318v1